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dnajb6b DnaJ heat shock protein family (Hsp40) member B6b [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104932630, updated on 12-Mar-2024

Summary

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Gene symbol
dnajb6b
Gene description
DnaJ heat shock protein family (Hsp40) member B6b
Locus tag
EH28_19961
See related
Ensembl:ENSLCRG00005023027
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Also known as
DnaJ; dnajb6
Orthologs
human zebrafish all
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Genomic context

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See dnajb6b in Genome Data Viewer
Location:
chromosome: XXIII
Exon count:
12
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XXIII NC_040033.1 (8398709..8422287, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609176.1 (1467759..1492572, complement)

Chromosome XXIII - NC_040033.1Genomic Context describing neighboring genes Neighboring gene non-SMC condensin II complex, subunit G2 Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene ubiquitin protein ligase E3C Neighboring gene motor neuron and pancreas homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6
Names
DnaJ heat shock protein family (Hsp40) member B6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040033.1 Reference L_crocea_2.0 Primary Assembly

    Range
    8398709..8422287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010747908.3 → XP_010746210.2  dnaJ homolog subfamily B member 6 isoform X1

    Related
    ENSLCRP00005062725.1, ENSLCRT00005063730.1

  2. XM_010747909.3 → XP_010746211.2  dnaJ homolog subfamily B member 6 isoform X1

  3. XM_019271650.2 → XP_019127195.1  dnaJ homolog subfamily B member 6 isoform X1

  4. XM_010747910.3 → XP_010746212.2  dnaJ homolog subfamily B member 6 isoform X2

    UniProtKB/TrEMBL
    A0A6G0HLE9
Nucleotide Protein
Heading Accession and Version

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