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LOC104932218 beta-1,4 N-acetylgalactosaminyltransferase 2-like [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104932218, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104932218
Gene description
beta-1,4 N-acetylgalactosaminyltransferase 2-like
See related
Ensembl:ENSLCRG00005017178
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
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Genomic context

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See LOC104932218 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
12
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XII NC_040022.1 (11232481..11246777)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608435.1 (140419..153621, complement)

Chromosome XII - NC_040022.1Genomic Context describing neighboring genes Neighboring gene N-acetylglutamate synthase Neighboring gene NACHT, LRR and PYD domains-containing protein 12 Neighboring gene cytochrome c oxidase assembly factor 3 homolog, mitochondrial Neighboring gene Versican core protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in UDP-N-acetylgalactosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040022.1 Reference L_crocea_2.0 Primary Assembly

    Range
    11232481..11246777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027284843.1 → XP_027140644.1  beta-1,4 N-acetylgalactosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A6G0HX22
    Related
    ENSLCRP00005044866.1, ENSLCRT00005045641.1
Nucleotide Protein
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