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unm_hu7910 un-named hu7910 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104932208, updated on 12-Mar-2024

Summary

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Gene symbol
unm_hu7910
Gene description
un-named hu7910
Locus tag
EH28_06468
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Also known as
asph
Orthologs
zebrafish all
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Genomic context

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See unm_hu7910 in Genome Data Viewer
Location:
chromosome: XXIII
Exon count:
27
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XXIII NC_040033.1 (215622..242572)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609025.1 (327507..358044, complement)

Chromosome XXIII - NC_040033.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene sodium channel protein type 4 subunit alpha Neighboring gene uncharacterized LOC113744484 Neighboring gene uncharacterized abhydrolase domain-containing protein DDB_G0269086-like Neighboring gene clavesin-1 Neighboring gene RIO kinase 3 (yeast)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase
Names
aspartate beta-hydroxylase
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040033.1 Reference L_crocea_2.0 Primary Assembly

    Range
    215622..242572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027274078.1 → XP_027129879.1  LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase

Nucleotide Protein
Heading Accession and Version

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