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hs3st3l heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104927397, updated on 12-Mar-2024

Summary

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Gene symbol
hs3st3l
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like
Locus tag
EH28_10754
See related
Ensembl:ENSLCRG00005008183
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
zebrafish all
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Genomic context

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See hs3st3l in Genome Data Viewer
Location:
chromosome: XVI
Exon count:
3
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XVI NC_040026.1 (3459581..3474523, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609337.1 (158623..173256, complement)

Chromosome XVI - NC_040026.1Genomic Context describing neighboring genes Neighboring gene glucagon like peptide 2 receptor Neighboring gene germ cell-specific gene 1-like protein Neighboring gene dehydrogenase/reductase (SDR family) member 7Cb Neighboring gene myosin phosphatase Rho interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1
Names
Heparan sulfate glucosamine 3-O-sulfotransferase 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040026.1 Reference L_crocea_2.0 Primary Assembly

    Range
    3459581..3474523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010741470.3 → XP_010739772.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1

    See identical proteins and their annotated locations for XP_010739772.1

    UniProtKB/TrEMBL
    A0A0F8CCG1
    Related
    ENSLCRP00005020047.1, ENSLCRT00005020448.1
    Conserved Domains (1) summary
    pfam00685
    Location:111 → 349
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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