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xylt1 xylosyltransferase I [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104927359, updated on 12-Mar-2024

Summary

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Gene symbol
xylt1
Gene description
xylosyltransferase I
Locus tag
EH28_24262
See related
Ensembl:ENSLCRG00005018789
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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See xylt1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) X NC_040020.1 (39739625..39815251, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608318.1 (1505470..1580412, complement)

Chromosome X - NC_040020.1Genomic Context describing neighboring genes Neighboring gene notum pectinacetylesterase 2 Neighboring gene ribosomal protein S15a Neighboring gene proliferating cell nuclear antigen pseudogene Neighboring gene nodal modulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040020.1 Reference L_crocea_2.0 Primary Assembly

    Range
    39739625..39815251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010741418.3 → XP_010739720.3  xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A6G0JB14
    Related
    ENSLCRP00005049869.1, ENSLCRT00005050684.1
Nucleotide Protein
Heading Accession and Version

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