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alg12 ALG12 alpha-1,6-mannosyltransferase [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104926575, updated on 12-Mar-2024

Summary

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Gene symbol
alg12
Gene description
ALG12 alpha-1,6-mannosyltransferase
Locus tag
EH28_14569
See related
Ensembl:ENSLCRG00005023244
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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See alg12 in Genome Data Viewer
Location:
chromosome: XX
Exon count:
9
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XX NC_040030.1 (13126359..13129711)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609697.1 (741364..744717)

Chromosome XX - NC_040030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109143054 Neighboring gene cysteine-rich with EGF-like domains 2 Neighboring gene zinc finger, BED-type containing 4 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene bromodomain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
Names
Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040030.1 Reference L_crocea_2.0 Primary Assembly

    Range
    13126359..13129711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019278934.2 → XP_019134479.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

    Related
    ENSLCRP00005063380.1, ENSLCRT00005064393.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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