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chst1 carbohydrate sulfotransferase 1 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104925835, updated on 9-Nov-2023

Summary

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Gene symbol
chst1
Gene description
carbohydrate sulfotransferase 1
Locus tag
EH28_24492
See related
Ensembl:ENSLCRG00005014872
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
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Genomic context

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See chst1 in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
2
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) VIII NC_040018.1 (5467490..5475666)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609289.1 (1880398..1888540)

Chromosome VIII - NC_040018.1Genomic Context describing neighboring genes Neighboring gene peptidase domain containing associated with muscle regeneration 1a Neighboring gene solute carrier family 35 member C1 Neighboring gene malignant fibrous histiocytoma-amplified sequence 1 homolog Neighboring gene guanylyl cyclase-activating protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables keratan sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040018.1 Reference L_crocea_2.0 Primary Assembly

    Range
    5467490..5475666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019273442.2 → XP_019128987.1  carbohydrate sulfotransferase 1

    UniProtKB/TrEMBL
    A0A6G0J278
    Related
    ENSLCRP00005038324.1, ENSLCRT00005039023.1
    Conserved Domains (1) summary
    cl21551
    Location:214 → 401
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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