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LOC104922533 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104922533, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104922533
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Locus tag
EH28_25034
See related
Ensembl:ENSLCRG00005010341
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
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Genomic context

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See LOC104922533 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
16
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XIII NC_040023.1 (40898225..40973764, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608616.1 (1425650..1500872)

Chromosome XIII - NC_040023.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 3b Neighboring gene transmembrane protein 42 Neighboring gene oxysterol binding protein like 10 Neighboring gene transforming growth factor beta receptor 2b Neighboring gene uncharacterized LOC113747284 Neighboring gene RNA binding motif, single stranded interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040023.1 Reference L_crocea_2.0 Primary Assembly

    Range
    40898225..40973764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019264225.2 → XP_019119770.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    UniProtKB/TrEMBL
    A0A6G0HSD5
    Related
    ENSLCRP00005025996.1, ENSLCRT00005026468.1
    Conserved Domains (1) summary
    pfam02516
    Location:53 → 545
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
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