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hs3st1l1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104921922, updated on 12-Mar-2024

Summary

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Gene symbol
hs3st1l1
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1
Locus tag
EH28_13881
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
zebrafish all
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Genomic context

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See hs3st1l1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) III NC_040013.1 (46500191..46522595, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609341.1 (978983..1001111, complement)

Chromosome III - NC_040013.1Genomic Context describing neighboring genes Neighboring gene homeobox protein vent1 Neighboring gene uncharacterized LOC113745665 Neighboring gene deoxynucleotidyltransferase, terminal Neighboring gene zinc finger protein 518A Neighboring gene B cell linker

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040013.1 Reference L_crocea_2.0 Primary Assembly

    Range
    46500191..46522595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010734602.3 → XP_010732904.2  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A6G0HMW8
Nucleotide Protein
Heading Accession and Version

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