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st8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104921697, updated on 12-Mar-2024

Summary

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Gene symbol
st8sia2
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
Locus tag
EH28_13056
See related
Ensembl:ENSLCRG00005021721
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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See st8sia2 in Genome Data Viewer
Location:
chromosome: XXI
Exon count:
6
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XXI NC_040031.1 (17708021..17719332)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609753.1 (864527..876233, complement)

Chromosome XXI - NC_040031.1Genomic Context describing neighboring genes Neighboring gene si:dkeyp-59c12.1 Neighboring gene solute carrier organic anion transporter family member 3A1a Neighboring gene family with sequence similarity 174 member B Neighboring gene chromodomain helicase DNA binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8B
Names
Alpha-2,8-sialyltransferase 8B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040031.1 Reference L_crocea_2.0 Primary Assembly

    Range
    17708021..17719332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010734311.3 → XP_010732613.3  alpha-2,8-sialyltransferase 8B

    UniProtKB/TrEMBL
    A0A6G0IYM7
    Related
    ENSLCRP00005058505.1, ENSLCRT00005059441.1
    Conserved Domains (1) summary
    pfam00777
    Location:111 → 370
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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