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colgalt2a collagen beta(1-O)galactosyltransferase 2a [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104920987, updated on 12-Mar-2024

Summary

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Gene symbol
colgalt2a
Gene description
collagen beta(1-O)galactosyltransferase 2a
Locus tag
EH28_20417
See related
Ensembl:ENSLCRG00005012797
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Also known as
colgalt2; si:ch211-13f8.2
Orthologs
zebrafish all
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Genomic context

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See colgalt2a in Genome Data Viewer
Location:
chromosome: XII
Exon count:
12
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XII NC_040022.1 (18320767..18326148)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608227.1 (1498091..1503410, complement)

Chromosome XII - NC_040022.1Genomic Context describing neighboring genes Neighboring gene Hypothetical protein Neighboring gene TSEN15 tRNA splicing endonuclease subunit Neighboring gene uncharacterized LOC104920918 Neighboring gene uncharacterized LOC104920988

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2
Names
collagen beta(1-O)galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040022.1 Reference L_crocea_2.0 Primary Assembly

    Range
    18320767..18326148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010733403.3 → XP_010731705.3  procollagen galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A6G0II18
    Related
    ENSLCRP00005032840.1, ENSLCRT00005033483.1
Nucleotide Protein
Heading Accession and Version

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