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LOC104919265 carbohydrate sulfotransferase 11 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104919265, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104919265
Gene description
carbohydrate sulfotransferase 11
Locus tag
EH28_16584
See related
Ensembl:ENSLCRG00005021973
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
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Genomic context

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See LOC104919265 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
5
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XV NC_040025.1 (4059706..4078272)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017608806.1 (481868..499936, complement)

Chromosome XV - NC_040025.1Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 6a Neighboring gene plexin-A1 Neighboring gene solute carrier family 41 member 3 Neighboring gene Krueppel-like factor 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040025.1 Reference L_crocea_2.0 Primary Assembly

    Range
    4059706..4078272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019266421.2 → XP_019121966.1  carbohydrate sulfotransferase 11 isoform X1

    Related
    ENSLCRP00005059343.1, ENSLCRT00005060290.1
    Conserved Domains (1) summary
    pfam03567
    Location:100 → 330
    Sulfotransfer_2; Sulfotransferase family

  2. XM_027288558.1 → XP_027144359.1  carbohydrate sulfotransferase 11 isoform X2

    UniProtKB/TrEMBL
    A0A6G0IP63
    Related
    ENSLCRP00005059342.1, ENSLCRT00005060289.1
    Conserved Domains (1) summary
    pfam03567
    Location:99 → 329
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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