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sh3rf1 SH3 domain containing ring finger 1 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104919072, updated on 12-Mar-2024

Summary

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Gene symbol
sh3rf1
Gene description
SH3 domain containing ring finger 1
Locus tag
EH28_15536
See related
Ensembl:ENSLCRG00005016607
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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See sh3rf1 in Genome Data Viewer
Location:
chromosome: XVII
Exon count:
13
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XVII NC_040027.1 (12898906..12930442, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609668.1 (541074..571065, complement)

Chromosome XVII - NC_040027.1Genomic Context describing neighboring genes Neighboring gene anaphase promoting complex subunit 4 Neighboring gene palladin, cytoskeletal associated protein Neighboring gene carbonyl reductase 4 Neighboring gene NIMA-related kinase 1 Neighboring gene F-box and leucine-rich repeat protein 5 Neighboring gene coiled-coil and C2 domain containing 2A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase SH3RF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040027.1 Reference L_crocea_2.0 Primary Assembly

    Range
    12898906..12930442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019278284.2 → XP_019133829.2  E3 ubiquitin-protein ligase SH3RF1 isoform X3

    UniProtKB/TrEMBL
    A0A6G0ISS4
    Related
    ENSLCRP00005043268.1, ENSLCRT00005044029.1

  2. XM_010730991.3 → XP_010729293.3  E3 ubiquitin-protein ligase SH3RF1 isoform X2

    UniProtKB/TrEMBL
    A0A6G0ISS4
    Related
    ENSLCRP00005043267.1, ENSLCRT00005044028.1

  3. XM_019278282.2 → XP_019133827.2  E3 ubiquitin-protein ligase SH3RF1 isoform X1

    UniProtKB/TrEMBL
    A0A6G0ISS4
    Related
    ENSLCRP00005043264.1, ENSLCRT00005044025.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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