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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104918319, updated on 12-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Locus tag
EH28_22076
See related
Ensembl:ENSLCRG00005003452
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: XI
Exon count:
8
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XI NC_040021.1 (18314151..18351350, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609727.1 (1966502..2003243)

Chromosome XI - NC_040021.1Genomic Context describing neighboring genes Neighboring gene glycoprotein integral membrane 1 Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene cyclin-dependent kinase 19 Neighboring gene adenosylmethionine decarboxylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040021.1 Reference L_crocea_2.0 Primary Assembly

    Range
    18314151..18351350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027284181.1 → XP_027139982.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X5

  2. XM_019253325.2 → XP_019108870.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

  3. XM_019253324.2 → XP_019108869.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Related
    ENSLCRP00005006902.1, ENSLCRT00005007141.1

  4. XM_010730034.3 → XP_010728336.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A6G0I6X3
    Conserved Domains (4) summary
    smart00547
    Location:725 → 748
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:726 → 745
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09770
    Location:225 → 302
    PAT1; Topoisomerase II-associated protein PAT1

  5. XM_010730033.3 → XP_010728335.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    See identical proteins and their annotated locations for XP_010728335.1

    UniProtKB/TrEMBL
    A0A4P8PAH5
    Related
    ENSLCRP00005006901.1, ENSLCRT00005007140.1
    Conserved Domains (3) summary
    smart00547
    Location:730 → 753
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:731 → 750
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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