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LOC104908805 galacturonosyltransferase 8 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104908805, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104908805
Gene description
galacturonosyltransferase 8
Locus tag
BVRB_7g178850
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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See LOC104908805 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 7 NC_079208.1 (44193771..44197018)
102 previous assembly EL10_1.0 (GCF_002917755.1) 7 NC_064023.1 (50452932..50456316)

Chromosome 7 - NC_079208.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene probable fructokinase-5 Neighboring gene nuclear transport factor 2 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079208.1 Reference EL10.2 Primary Assembly

    Range
    44193771..44197018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010697960.4 → XP_010696262.1  galacturonosyltransferase 8

    See identical proteins and their annotated locations for XP_010696262.1

    UniProtKB/TrEMBL
    A0A0J8BAV0
    Conserved Domains (2) summary
    cd06429
    Location:241 → 538
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02523
    Location:7 → 551
    PLN02523; galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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