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LOC104906645 cellulose synthase-like protein D4 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104906645, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104906645
Gene description
cellulose synthase-like protein D4
Locus tag
BVRB_3g068010
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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See LOC104906645 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 3 NC_079204.1 (12367772..12373387, complement)
102 previous assembly EL10_1.0 (GCF_002917755.1) 3 NC_064019.1 (12340128..12345743, complement)

Chromosome 3 - NC_079204.1Genomic Context describing neighboring genes Neighboring gene U-box domain-containing protein 35 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene NF-X1-type zinc finger protein NFXL1 Neighboring gene uncharacterized protein At2g29880-like Neighboring gene uncharacterized LOC125495971

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase-like protein D4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079204.1 Reference EL10.2 Primary Assembly

    Range
    12367772..12373387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057393597.1 → XP_057249580.1  cellulose synthase-like protein D4

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases