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LOC104901664 eukaryotic translation initiation factor [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104901664, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104901664
Gene description
eukaryotic translation initiation factor
Locus tag
BVRB_8g190870
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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See LOC104901664 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 8 NC_079209.1 (50719296..50722164)
102 previous assembly EL10_1.0 (GCF_002917755.1) 8 NC_064024.1 (10935817..10948633, complement)

Chromosome 8 - NC_079209.1Genomic Context describing neighboring genes Neighboring gene peroxiredoxin Q, chloroplastic Neighboring gene eukaryotic translation initiation factor-like Neighboring gene eukaryotic translation initiation factor-like Neighboring gene hypothetical protein Neighboring gene respiratory burst oxidase homolog protein E Neighboring gene drimenol monooxygenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: eukaryotic translation initiation factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079209.1 Reference EL10.2 Primary Assembly

    Range
    50719296..50722164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057391296.1 → XP_057247279.1  LOW QUALITY PROTEIN: eukaryotic translation initiation factor

Nucleotide Protein
Heading Accession and Version

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