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LOC104899624 probable disease resistance protein At4g27220 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104899624, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104899624
Gene description
probable disease resistance protein At4g27220
Locus tag
BVRB_7g168550
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 7 NC_079208.1 (50432464..50435965, complement)
102 previous assembly EL10_1.0 (GCF_002917755.1) 7 NC_064023.1 (56501750..56505250, complement)

Chromosome 7 - NC_079208.1Genomic Context describing neighboring genes Neighboring gene probable disease resistance protein At1g52660 Neighboring gene probable disease resistance protein At1g52660 Neighboring gene probable disease resistance protein At1g52660 Neighboring gene uncharacterized LOC109135566

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable disease resistance protein At4g27220

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079208.1 Reference EL10.2 Primary Assembly

    Range
    50432464..50435965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019250928.3 → XP_019106473.1  probable disease resistance protein At4g27220

  2. XM_010686846.4 → XP_010685148.1  probable disease resistance protein At4g27220

    See identical proteins and their annotated locations for XP_010685148.1

    Conserved Domains (3) summary
    sd00033
    Location:438 → 461
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00931
    Location:68 → 336
    NB-ARC; NB-ARC domain
    pfam13855
    Location:436 → 490
    LRR_8; Leucine rich repeat
Nucleotide Protein
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