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LOC104898062 disease resistance protein RPM1 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104898062, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104898062
Gene description
disease resistance protein RPM1
Locus tag
BVRB_6g152760
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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See LOC104898062 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 6 NC_079207.1 (68718341..68723705, complement)
102 previous assembly EL10_1.0 (GCF_002917755.1) 6 NC_064022.1 (3705349..3710718)

Chromosome 6 - NC_079207.1Genomic Context describing neighboring genes Neighboring gene CSC1-like protein At4g35870 Neighboring gene hypothetical protein Neighboring gene disease resistance protein RPM1 Neighboring gene probable rhamnogalacturonate lyase B Neighboring gene pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to other organism IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
disease resistance protein RPM1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079207.1 Reference EL10.2 Primary Assembly

    Range
    68718341..68723705 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010685069.4 → XP_010683371.2  disease resistance protein RPM1

Nucleotide Protein
Heading Accession and Version

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