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LOC104892919 mitochondrial carnitine/acylcarnitine carrier-like protein [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104892919, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104892919
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
BVRB_5g106010
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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See LOC104892919 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 5 NC_079206.1 (16396142..16401442)
102 previous assembly EL10_1.0 (GCF_002917755.1) 5 NC_064021.1 (43629792..43635091, complement)

Chromosome 5 - NC_079206.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130591684 Neighboring gene uncharacterized LOC104892920 Neighboring gene putative late blight resistance protein homolog R1B-17 Neighboring gene putative late blight resistance protein homolog R1A-3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079206.1 Reference EL10.2 Primary Assembly

    Range
    16396142..16401442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010678942.4 → XP_010677244.2  mitochondrial carnitine/acylcarnitine carrier-like protein

  2. XM_048644813.2 → XP_048500770.1  mitochondrial carnitine/acylcarnitine carrier-like protein

  3. XM_010678943.3 → XP_010677245.2  mitochondrial carnitine/acylcarnitine carrier-like protein

Nucleotide Protein
Heading Accession and Version

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