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LOC104890306 respiratory burst oxidase homolog protein B [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104890306, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104890306
Gene description
respiratory burst oxidase homolog protein B
Locus tag
BVRB_4g075730
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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See LOC104890306 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 4 NC_079205.1 (60304336..60314428, complement)
102 previous assembly EL10_1.0 (GCF_002917755.1) 4 NC_064020.1 (56024495..56034592, complement)

Chromosome 4 - NC_079205.1Genomic Context describing neighboring genes Neighboring gene ferritin-like catalase Nec2 Neighboring gene hypothetical protein Neighboring gene uncharacterized LOC125497064 Neighboring gene uncharacterized LOC104890304

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD(P)H oxidase H2O2-forming activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
respiratory burst oxidase homolog protein B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079205.1 Reference EL10.2 Primary Assembly

    Range
    60304336..60314428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010675737.4 → XP_010674039.1  respiratory burst oxidase homolog protein B

    See identical proteins and their annotated locations for XP_010674039.1

    UniProtKB/TrEMBL
    A0A0J8FEF7
    Conserved Domains (6) summary
    cd00051
    Location:196 → 244
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam01794
    Location:386 → 534
    Ferric_reduct; Ferric reductase like transmembrane component
    pfam08022
    Location:576 → 695
    FAD_binding_8; FAD-binding domain
    pfam08030
    Location:701 → 869
    NAD_binding_6; Ferric reductase NAD binding domain
    pfam08414
    Location:124 → 216
    NADPH_Ox; Respiratory burst NADPH oxidase
    pfam13499
    Location:182 → 243
    EF-hand_7; EF-hand domain pair

  2. XM_057394494.1 → XP_057250477.1  respiratory burst oxidase homolog protein B

    UniProtKB/TrEMBL
    A0A0J8FEF7
Nucleotide Protein
Heading Accession and Version

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