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LOC104890228 probable WRKY transcription factor 2 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104890228, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104890228
Gene description
probable WRKY transcription factor 2
Locus tag
BVRB_4g075270
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

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See LOC104890228 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 4 NC_079205.1 (60666760..60674345)
102 previous assembly EL10_1.0 (GCF_002917755.1) 4 NC_064020.1 (56387143..56393267)

Chromosome 4 - NC_079205.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104890232 Neighboring gene seipin-1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene probable WRKY transcription factor 2 Neighboring gene tyrosine-protein phosphatase DSP3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WRKY transcription factor SUSIBA2; probable WRKY transcription factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079205.1 Reference EL10.2 Primary Assembly

    Range
    60666760..60674345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057394501.1 → XP_057250484.1  probable WRKY transcription factor 2 isoform X3

  2. XM_019248878.3 → XP_019104423.1  WRKY transcription factor SUSIBA2 isoform X1

  3. XM_019248880.3 → XP_019104425.1  WRKY transcription factor SUSIBA2 isoform X1

  4. XM_019248879.3 → XP_019104424.1  WRKY transcription factor SUSIBA2 isoform X1

  5. XM_010675633.4 → XP_010673935.1  WRKY transcription factor SUSIBA2 isoform X1

    See identical proteins and their annotated locations for XP_010673935.1

    Conserved Domains (1) summary
    smart00774
    Location:517 → 574
    WRKY; DNA binding domain

  6. XM_048643595.2 → XP_048499552.1  WRKY transcription factor SUSIBA2 isoform X2

RNA

  1. XR_007273711.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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