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LOC104888277 cyclic nucleotide-gated ion channel 1 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104888277, updated on 9-Nov-2023

Summary

Gene symbol
LOC104888277
Gene description
cyclic nucleotide-gated ion channel 1
Locus tag
BVRB_3g052330
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Genomic context

Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 3 NC_079204.1 (4920131..4927358, complement)
102 previous assembly EL10_1.0 (GCF_002917755.1) 3 NC_064019.1 (4889741..4896971, complement)

Chromosome 3 - NC_079204.1Genomic Context describing neighboring genes Neighboring gene thiamine-repressible mitochondrial transport protein THI74 Neighboring gene pentatricopeptide repeat-containing protein At4g02750-like Neighboring gene probable protein phosphatase 2C 76 Neighboring gene probable protein phosphatase 2C 55

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
cyclic nucleotide-gated ion channel 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079204.1 Reference EL10.2 Primary Assembly

    Range
    4920131..4927358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010673191.4XP_010671493.2  cyclic nucleotide-gated ion channel 1