U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC104884006 berberine bridge enzyme-like 13 [ Beta vulgaris subsp. vulgaris ]

Gene ID: 104884006, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC104884006
Gene description
berberine bridge enzyme-like 13
Locus tag
BVRB_005260
Gene type
protein coding
RefSeq status
MODEL
Organism
Beta vulgaris subsp. vulgaris (sub-species: vulgaris)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC104884006 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_06 current EL10.2 (GCF_026745355.1) 5 NC_079206.1 (57391233..57393105, complement)
102 previous assembly EL10_1.0 (GCF_002917755.1) 5 NC_064021.1 (8777671..8779541)

Chromosome 5 - NC_079206.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase U10 Neighboring gene glutathione S-transferase U9 Neighboring gene uncharacterized LOC125497428 Neighboring gene vacuolar protein sorting-associated protein 45 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
berberine bridge enzyme-like 13
Names
reticuline oxidase-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_026745355.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EL10.2 Primary Assembly

Genomic

  1. NC_079206.1 Reference EL10.2 Primary Assembly

    Range
    57391233..57393105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010668590.3 → XP_010666892.1  berberine bridge enzyme-like 13

    See identical proteins and their annotated locations for XP_010666892.1

    UniProtKB/TrEMBL
    A0A0J8B714
    Conserved Domains (3) summary
    COG0277
    Location:75 → 526
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:75 → 214
    FAD_binding_4; FAD binding domain
    pfam08031
    Location:467 → 524
    BBE; Berberine and berberine like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases