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Adad1 adenosine deaminase domain containing 1 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104853225, updated on 12-Mar-2024

Summary

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Gene symbol
Adad1
Gene description
adenosine deaminase domain containing 1
Locus tag
H920_01826
See related
Ensembl:ENSFDAG00000010164
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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See Adad1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900950.1 (15032288..15079641, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011043885.1 (3746518..3793878)

NW_022900950.1Genomic Context describing neighboring genes Neighboring gene interleukin 21 Neighboring gene interleukin 2 Neighboring gene bridge-like lipid transfer protein family member 1 Neighboring gene transmembrane protein 126A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA-specific adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenosine deaminase domain-containing protein 1
Names
Adenosine deaminase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900950.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    15032288..15079641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010611133.2 → XP_010609435.1  adenosine deaminase domain-containing protein 1

    UniProtKB/TrEMBL
    A0A091DXF9
    Related
    ENSFDAP00000018001.1
    Conserved Domains (2) summary
    smart00358
    Location:138 → 203
    DSRM; Double-stranded RNA binding motif
    pfam02137
    Location:290 → 610
    A_deamin; Adenosine-deaminase (editase) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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