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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Haliaeetus leucocephalus (bald eagle) ]

Gene ID: 104831652, updated on 3-Aug-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus leucocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Haliaeetus_leucocephalus-4.0 (GCF_000737465.1) Unplaced Scaffold NW_010972664.1 (16806927..16897210, complement)

NW_010972664.1Genomic Context describing neighboring genes Neighboring gene cell cycle control protein 50C-like Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene collagen type VIII alpha 1 chain Neighboring gene uncharacterized LOC104831654 Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010972664.1 Unplaced Scaffold Reference Haliaeetus_leucocephalus-4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus leucocephalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Haliaeetus_leucocephalus-4.0

Genomic

  1. NW_010972664.1 Reference Haliaeetus_leucocephalus-4.0

    Range
    16806927..16897210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010567362.1 → XP_010565664.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:119 → 337
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_010567369.1 → XP_010565671.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X5

    See identical proteins and their annotated locations for XP_010565671.1

    Conserved Domains (1) summary
    pfam00777
    Location:64 → 310
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_010567361.1 → XP_010565663.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_010565663.1

    Conserved Domains (1) summary
    pfam00777
    Location:119 → 365
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_010567359.1 → XP_010565661.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_010565661.1

    Conserved Domains (1) summary
    pfam00777
    Location:119 → 365
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_010567366.1 → XP_010565668.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    See identical proteins and their annotated locations for XP_010565668.1

    Conserved Domains (1) summary
    pfam00777
    Location:106 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_010567368.1 → XP_010565670.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X5

    See identical proteins and their annotated locations for XP_010565670.1

    Conserved Domains (1) summary
    pfam00777
    Location:64 → 310
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  7. XM_010567367.1 → XP_010565669.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

    Conserved Domains (1) summary
    pfam00777
    Location:96 → 342
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  8. XM_010567358.1 → XP_010565660.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_010565660.1

    Conserved Domains (1) summary
    pfam00777
    Location:119 → 365
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  9. XM_010567365.1 → XP_010565667.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    See identical proteins and their annotated locations for XP_010565667.1

    Conserved Domains (1) summary
    pfam00777
    Location:106 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  10. XM_010567364.1 → XP_010565666.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    See identical proteins and their annotated locations for XP_010565666.1

    Conserved Domains (1) summary
    pfam00777
    Location:106 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  11. XM_010567370.1 → XP_010565672.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X5

    See identical proteins and their annotated locations for XP_010565672.1

    Conserved Domains (1) summary
    pfam00777
    Location:64 → 310
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  12. XM_010567360.1 → XP_010565662.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_010565662.1

    Conserved Domains (1) summary
    pfam00777
    Location:119 → 365
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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