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LOC104822992 mediator of RNA polymerase II transcription subunit 23 [ Tarenaya hassleriana ]

Gene ID: 104822992, updated on 21-Dec-2023

Summary

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Gene symbol
LOC104822992
Gene description
mediator of RNA polymerase II transcription subunit 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Tarenaya hassleriana
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; New World clade; Tarenaya
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Genomic context

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See LOC104822992 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM46358v1 (GCF_000463585.1) Unplaced Scaffold NW_010966822.1 (898708..909118, complement)

NW_010966822.1Genomic Context describing neighboring genes Neighboring gene probable peroxygenase 4 Neighboring gene cysteine-rich repeat secretory protein 2 Neighboring gene dynein light chain 1, cytoplasmic Neighboring gene endoglucanase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010966822.1 Unplaced Scaffold Reference ASM46358v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tarenaya hassleriana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM46358v1

Genomic

  1. NW_010966822.1 Reference ASM46358v1

    Range
    898708..909118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010554381.2 → XP_010552683.1  mediator of RNA polymerase II transcription subunit 23

    Conserved Domains (1) summary
    pfam11573
    Location:687 → 1308
    Med23; Mediator complex subunit 23
Nucleotide Protein
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