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MIR409 microRNA mir-409 [ Eptesicus fuscus (big brown bat) ]

Gene ID: 104795471, updated on 30-Mar-2024

Summary

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Gene symbol
MIR409
Gene description
microRNA mir-409
See related
miRBase:MI0028726
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Also known as
efu-mir-409
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

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See MIR409 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 5 NC_072477.1 (6747514..6747589)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370757.1 (833032..833174, complement)

Chromosome 5 - NC_072477.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-485 Neighboring gene microRNA mir-154 Neighboring gene microRNA mir-412 Neighboring gene uncharacterized LOC129148953

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats. Platt RN 2nd, et al. Mol Biol Evol, 2014 Jun. PMID 24692655
  2. miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381832, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • microRNA 409

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_129110.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    JANZWY010000003

RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072477.1 Reference DD_ASM_mEF_20220401

    Range
    6747514..6747589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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