U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC104777194 alkylated DNA repair protein alkB homolog 8-like [ Camelina sativa (false flax) ]

Gene ID: 104777194, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC104777194
Gene description
alkylated DNA repair protein alkB homolog 8-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC104777194 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 3 NC_025687.1 (15450392..15452005, complement)

Chromosome 3 - NC_025687.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104777192 Neighboring gene GDSL esterase/lipase At1g31550-like Neighboring gene agamous-like MADS-box protein AGL86 Neighboring gene agamous-like MADS-box protein AGL86

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_025687.1 Chromosome 3 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alkylated DNA repair protein alkB homolog 8-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025687.1 Reference Cs

    Range
    15450392..15452005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010501407.2 → XP_010499709.1  alkylated DNA repair protein alkB homolog 8-like

    Conserved Domains (2) summary
    cl17169
    Location:23 → 101
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl21496
    Location:127 → 325
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases