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LOC104771943 mitochondrial carnitine/acylcarnitine carrier-like protein [ Camelina sativa (false flax) ]

Gene ID: 104771943, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104771943
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104771943 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 20 NC_025704.1 (28690685..28692680, complement)

Chromosome 20 - NC_025704.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109131447 Neighboring gene ubiquitin-conjugating enzyme E2 2-like Neighboring gene uncharacterized LOC104771944 Neighboring gene uncharacterized protein At4g04775-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025704.1 Chromosome 20 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025704.1 Reference Cs

    Range
    28690685..28692680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010496563.2 → XP_010494865.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    See identical proteins and their annotated locations for XP_010494865.1

    Conserved Domains (1) summary
    pfam00153
    Location:209 → 300
    Mito_carr; Mitochondrial carrier protein

  2. XM_010496564.2 → XP_010494866.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    See identical proteins and their annotated locations for XP_010494866.1

    Conserved Domains (1) summary
    pfam00153
    Location:209 → 300
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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