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LOC104770818 starch synthase 1, chloroplastic/amyloplastic [ Camelina sativa (false flax) ]

Gene ID: 104770818, updated on 18-Sep-2024

Summary

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Gene symbol
LOC104770818
Gene description
starch synthase 1, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104770818 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 20 NC_025704.1 (14607169..14611986)

Chromosome 20 - NC_025704.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104770817 Neighboring gene membrane protein of ER body 2-like Neighboring gene protein ABIL3 Neighboring gene uncharacterized LOC109131351

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025704.1 Chromosome 20 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 1, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025704.1 Reference Cs

    Range
    14607169..14611986
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010495271.2 → XP_010493573.1  starch synthase 1, chloroplastic/amyloplastic

    Conserved Domains (2) summary
    cd03791
    Location:145 → 645
    GT1_Glycogen_synthase_DULL1_like; This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family ...
    TIGR02095
    Location:145 → 644
    glgA; glycogen/starch synthase, ADP-glucose type
Nucleotide Protein
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