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LOC104770670 GPI mannosyltransferase 2-like [ Camelina sativa (false flax) ]

Gene ID: 104770670, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104770670
Gene description
GPI mannosyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104770670 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 3 NC_025687.1 (5250285..5254584, complement)

Chromosome 3 - NC_025687.1Genomic Context describing neighboring genes Neighboring gene F-box/LRR-repeat/kelch-repeat protein At1g09650-like Neighboring gene serine--tRNA ligase, chloroplastic/mitochondrial Neighboring gene 25.3 kDa vesicle transport protein Neighboring gene pentatricopeptide repeat-containing protein At1g11900

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025687.1 Chromosome 3 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025687.1 Reference Cs

    Range
    5250285..5254584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010495132.1 → XP_010493434.1  GPI mannosyltransferase 2-like isoform X1

    Conserved Domains (1) summary
    pfam04188
    Location:15 → 493
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  2. XM_019243406.1 → XP_019098951.1  GPI mannosyltransferase 2-like isoform X2

Nucleotide Protein
Heading Accession and Version

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