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LOC104764754 probable galacturonosyltransferase 6 [ Camelina sativa (false flax) ]

Gene ID: 104764754, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104764754
Gene description
probable galacturonosyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104764754 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 3 NC_025687.1 (2788003..2791722)

Chromosome 3 - NC_025687.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin protein ligase DRIP1 Neighboring gene pumilio homolog 15-like Neighboring gene DNA-directed RNA polymerase III subunit RPC8-like Neighboring gene phospholipase A1-Igamma1, chloroplastic-like Neighboring gene prolycopene isomerase, chloroplastic-like Neighboring gene phospholipase A1-Igamma1, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025687.1 Chromosome 3 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025687.1 Reference Cs

    Range
    2788003..2791722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010488348.2 → XP_010486650.1  probable galacturonosyltransferase 6

    Conserved Domains (2) summary
    cd06429
    Location:308 → 582
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02718
    Location:1 → 596
    PLN02718; Probable galacturonosyltransferase
Nucleotide Protein
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