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LOC104734987 cellulose synthase A catalytic subunit 5 [UDP-forming] [ Camelina sativa (false flax) ]

Gene ID: 104734987, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104734987
Gene description
cellulose synthase A catalytic subunit 5 [UDP-forming]
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104734987 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 13 NC_025697.1 (3910516..3915553)

Chromosome 13 - NC_025697.1Genomic Context describing neighboring genes Neighboring gene SNW/SKI-interacting protein-like Neighboring gene THO complex subunit 1-like Neighboring gene uncharacterized LOC104734988 Neighboring gene RNA-binding protein 39

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025697.1 Chromosome 13 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 5 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025697.1 Reference Cs

    Range
    3910516..3915553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010454687.2 → XP_010452989.1  cellulose synthase A catalytic subunit 5 [UDP-forming]

    Conserved Domains (3) summary
    PLN02436
    Location:1 → 1068
    PLN02436; cellulose synthase A
    pfam14569
    Location:34 → 97
    zf-UDP; Zinc-binding RING-finger
    cl11394
    Location:511 → 819
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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