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LOC104717863 F-box protein GID2-like [ Camelina sativa (false flax) ]

Gene ID: 104717863, updated on 9-Nov-2023

Summary

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Gene symbol
LOC104717863
Gene description
F-box protein GID2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelina sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Genomic context

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See LOC104717863 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Cs (GCF_000633955.1) 10 NC_025694.1 (7968212..7969215, complement)

Chromosome 10 - NC_025694.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA-binding domain-containing protein 3-like Neighboring gene 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like Neighboring gene E3 ubiquitin-protein ligase SP1-like Neighboring gene uncharacterized LOC104720147

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025694.1 Chromosome 10 Reference Cs

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome analysis of an imminent biofuel crop, Camelina sativa L. using Illumina GAIIX sequencing platform and identification of SSR markers. Mudalkar S, et al. Plant Mol Biol, 2014 Jan. PMID 24002439
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cs

Genomic

  1. NC_025694.1 Reference Cs

    Range
    7968212..7969215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010435499.2 → XP_010433801.1  F-box protein GID2-like

    Conserved Domains (1) summary
    pfam00646
    Location:34 → 79
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases