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DDX42 DEAD-box helicase 42 [ Corvus cornix cornix ]

Gene ID: 104698644, updated on 3-Aug-2024

Summary

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Gene symbol
DDX42
Gene description
DEAD-box helicase 42
See related
EnsemblRapid:ENSCCCG00025009951
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See DDX42 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
18
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 23 NC_046352.1 (4645033..4661363, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959063.1 (409272..424560)

Chromosome 23 - NC_046352.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 27 Neighboring gene myosin light chain, embryonic Neighboring gene parathyroid hormone/parathyroid hormone-related peptide receptor-like Neighboring gene coiled-coil domain containing 47 Neighboring gene STE20 related adaptor alpha Neighboring gene E3 ubiquitin-protein ligase RNF113A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046352.1 Reference ASM73873v5 Primary Assembly

    Range
    4645033..4661363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039564508.1 → XP_039420442.1  ATP-dependent RNA helicase DDX42 isoform X1

    Related
    ENSCCCP00025017261.1, ENSCCCT00025020511.1
    Conserved Domains (1) summary
    PTZ00110
    Location:193 → 652
    PTZ00110; helicase; Provisional

  2. XM_039564509.1 → XP_039420443.1  ATP-dependent RNA helicase DDX42 isoform X2

    Conserved Domains (1) summary
    PTZ00110
    Location:30 → 489
    PTZ00110; helicase; Provisional
Nucleotide Protein
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