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SORD sorbitol dehydrogenase [ Corvus cornix cornix ]

Gene ID: 104697519, updated on 3-Aug-2024

Summary

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Gene symbol
SORD
Gene description
sorbitol dehydrogenase
See related
EnsemblRapid:ENSCCCG00025000989
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See SORD in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 10 NC_046340.1 (20201828..20221043)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010960106.1 (312024..327910, complement)

Chromosome 10 - NC_046340.1Genomic Context describing neighboring genes Neighboring gene ornithine decarboxylase antizyme 2 Neighboring gene RNA binding protein, mRNA processing factor 2 Neighboring gene dual oxidase 2-like Neighboring gene dual oxidase maturation factor 2 Neighboring gene dual oxidase maturation factor 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-iditol 2-dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sorbitol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorbitol dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046340.1 Reference ASM73873v5 Primary Assembly

    Range
    20201828..20221043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039557911.1 → XP_039413845.1  sorbitol dehydrogenase

    Related
    ENSCCCP00025001874.1, ENSCCCT00025002033.1
    Conserved Domains (1) summary
    cd05285
    Location:9 → 348
    sorbitol_DH; Sorbitol dehydrogenase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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