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NDST4 N-deacetylase and N-sulfotransferase 4 [ Corvus cornix cornix ]

Gene ID: 104696846, updated on 3-Aug-2024

Summary

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Gene symbol
NDST4
Gene description
N-deacetylase and N-sulfotransferase 4
See related
EnsemblRapid:ENSCCCG00025012539
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 4 NC_046334.1 (2552458..2622566, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010960041.1 (1747713..1817939, complement)

Chromosome 4 - NC_046334.1Genomic Context describing neighboring genes Neighboring gene UDP glycosyltransferase 8 Neighboring gene uncharacterized LOC109146220 Neighboring gene uncharacterized LOC120409882 Neighboring gene chromosome 4 C17orf58 homolog Neighboring gene transfer RNA arginine (anticodon CCG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4
Names
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046334.1 Reference ASM73873v5 Primary Assembly

    Range
    2552458..2622566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010411355.4 → XP_010409657.3  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4

    Related
    ENSCCCP00025021548.1, ENSCCCT00025025772.1
    Conserved Domains (2) summary
    pfam00685
    Location:595 → 846
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:20 → 506
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
Heading Accession and Version

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