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LOC104696661 serine/arginine-rich splicing factor 7 [ Corvus cornix cornix ]

Gene ID: 104696661, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104696661
Gene description
serine/arginine-rich splicing factor 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Also known as
SRSF7
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Genomic context

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See LOC104696661 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 3 NC_047056.1 (12086954..12094824, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959988.1 (1405708..1413192, complement)

Chromosome 3 - NC_047056.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein L like Neighboring gene uncharacterized LOC104696636 Neighboring gene galactose mutarotase Neighboring gene serine/arginine-rich splicing factor 7-like Neighboring gene gem nuclear organelle associated protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 7
Names
serine and arginine rich splicing factor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_047056.1 Reference ASM73873v5 Primary Assembly

    Range
    12086954..12094824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039568770.1 → XP_039424704.1  LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 7

    Conserved Domains (2) summary
    smart00343
    Location:105 → 119
    ZnF_C2HC; zinc finger
    cd12646
    Location:12 → 88
    RRM_SRSF7; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 7 (SRSF7)
Nucleotide Protein
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