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ACOT12 acyl-CoA thioesterase 12 [ Corvus cornix cornix ]

Gene ID: 104695825, updated on 3-Aug-2024

Summary

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Gene symbol
ACOT12
Gene description
acyl-CoA thioesterase 12
See related
EnsemblRapid:ENSCCCG00025010746
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See ACOT12 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
15
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) Z NC_046357.1 (75007719..75034165)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959912.1 (869824..891054, complement)

Chromosome Z - NC_046357.1Genomic Context describing neighboring genes Neighboring gene autophagy related 10 Neighboring gene single stranded DNA binding protein 2 Neighboring gene uncharacterized LOC109146023 Neighboring gene zinc finger CCHC-type containing 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A thioesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046357.1 Reference ASM73873v5 Primary Assembly

    Range
    75007719..75034165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039566483.1 → XP_039422417.1  acetyl-coenzyme A thioesterase

    Related
    ENSCCCP00025018531.1, ENSCCCT00025022062.1
    Conserved Domains (2) summary
    cd03442
    Location:5 → 110
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...
    cl14643
    Location:302 → 534
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
Nucleotide Protein
Heading Accession and Version

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