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SCP2 sterol carrier protein 2 [ Corvus cornix cornix ]

Gene ID: 104695523, updated on 3-Aug-2024

Summary

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Gene symbol
SCP2
Gene description
sterol carrier protein 2
See related
EnsemblRapid:ENSCCCG00025007609
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See SCP2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
16
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 8 NC_046338.1 (5589384..5608458, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959870.1 (5604062..5620847, complement)

Chromosome 8 - NC_046338.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 1 member 7 Neighboring gene podocan Neighboring gene enoyl-CoA hydratase domain containing 2 Neighboring gene zyg-11 family member B, cell cycle regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol carrier protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046338.1 Reference ASM73873v5 Primary Assembly

    Range
    5589384..5608458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039556489.1 → XP_039412423.1  sterol carrier protein 2 isoform X2

    Conserved Domains (2) summary
    PRK08256
    Location:3 → 394
    PRK08256; lipid-transfer protein; Provisional
    pfam02036
    Location:423 → 524
    SCP2; SCP-2 sterol transfer family

  2. XM_039556488.1 → XP_039412422.1  sterol carrier protein 2 isoform X1

    Related
    ENSCCCP00025013305.1, ENSCCCT00025015725.1
    Conserved Domains (2) summary
    PRK08256
    Location:3 → 394
    PRK08256; lipid-transfer protein; Provisional
    pfam02036
    Location:424 → 525
    SCP2; SCP-2 sterol transfer family
Nucleotide Protein
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