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LY75 lymphocyte antigen 75 [ Corvus cornix cornix ]

Gene ID: 104693938, updated on 3-Aug-2024

Summary

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Gene symbol
LY75
Gene description
lymphocyte antigen 75
See related
EnsemblRapid:ENSCCCG00025000945
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See LY75 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
35
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 7 NC_046337.1 (16330617..16374994, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959760.1 (16554110..16607530)

Chromosome 7 - NC_046337.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 4 member 3 Neighboring gene unconventional myosin-X-like Neighboring gene phospholipase A2 receptor 1 Neighboring gene integrin subunit beta 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lymphocyte antigen 75

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046337.1 Reference ASM73873v5 Primary Assembly

    Range
    16330617..16374994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039555281.1 → XP_039411215.1  lymphocyte antigen 75

    Related
    ENSCCCP00025001786.1, ENSCCCT00025001945.1
    Conserved Domains (4) summary
    smart00059
    Location:159 → 207
    FN2; Fibronectin type 2 domain
    cd00037
    Location:1113 → 1220
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:214 → 339
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:34 → 141
    RICIN; Ricin-type beta-trefoil
Nucleotide Protein
Heading Accession and Version

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