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LOC104692465 alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [ Corvus cornix cornix ]

Gene ID: 104692465, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104692465
Gene description
alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like
See related
EnsemblRapid:ENSCCCG00025016145
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
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Genomic context

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See LOC104692465 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
7
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 26 NC_046354.1 (6176050..6186389, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959640.1 (6165719..6175815, complement)

Chromosome 26 - NC_046354.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin like and fibronectin type III domain containing 1 Neighboring gene transmembrane protein 9 Neighboring gene transmembrane protein 183A Neighboring gene PTPRF interacting protein alpha 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046354.1 Reference ASM73873v5 Primary Assembly

    Range
    6176050..6186389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010404525.3 → XP_010402827.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X3

    Conserved Domains (1) summary
    pfam04666
    Location:21 → 272
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_010404524.3 → XP_010402826.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2

    Related
    ENSCCCP00025027507.1, ENSCCCT00025033451.1
    Conserved Domains (1) summary
    pfam04666
    Location:71 → 318
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  3. XM_019288992.2 → XP_019144537.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X1

    Related
    ENSCCCP00025027515.1, ENSCCCT00025033461.1

  4. XM_039565250.1 → XP_039421184.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2

    Conserved Domains (1) summary
    pfam04666
    Location:71 → 318
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  5. XM_019288997.2 → XP_019144542.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2

    Conserved Domains (1) summary
    pfam04666
    Location:71 → 318
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  6. XM_019288996.2 → XP_019144541.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2

    Conserved Domains (1) summary
    pfam04666
    Location:71 → 318
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  7. XM_039565252.1 → XP_039421186.1  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X4

    Related
    ENSCCCP00025027503.1, ENSCCCT00025033444.1
    Conserved Domains (1) summary
    pfam04666
    Location:130 → 377
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
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