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RBMX RNA binding motif protein X-linked [ Corvus cornix cornix ]

Gene ID: 104691324, updated on 3-Aug-2024

Summary

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Gene symbol
RBMX
Gene description
RNA binding motif protein X-linked
See related
EnsemblRapid:ENSCCCG00025011853
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4A
Exon count:
10
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 4A NC_047058.1 (3425330..3435895, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959552.1 (7870916..7885105)

Chromosome 4A - NC_047058.1Genomic Context describing neighboring genes Neighboring gene CD40 ligand Neighboring gene Rac/Cdc42 guanine nucleotide exchange factor 6 Neighboring gene small nucleolar RNA SNORD61 Neighboring gene transmembrane 9 superfamily member 2-like Neighboring gene Zic family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding motif protein, X chromosome

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_047058.1 Reference ASM73873v5 Primary Assembly

    Range
    3425330..3435895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039571823.1 → XP_039427757.1  RNA-binding motif protein, X chromosome isoform X2

    Related
    ENSCCCP00025020506.1, ENSCCCT00025024332.1
    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  2. XM_039571819.1 → XP_039427753.1  RNA-binding motif protein, X chromosome isoform X1

    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  3. XM_039571820.1 → XP_039427754.1  RNA-binding motif protein, X chromosome isoform X1

    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  4. XM_039571821.1 → XP_039427755.1  RNA-binding motif protein, X chromosome isoform X1

    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

  5. XM_039571822.1 → XP_039427756.1  RNA-binding motif protein, X chromosome isoform X1

    Conserved Domains (2) summary
    pfam08081
    Location:161 → 205
    RBM1CTR; RBM1CTR (NUC064) family
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins
Nucleotide Protein
Heading Accession and Version

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