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SRSF1 serine and arginine rich splicing factor 1 [ Corvus cornix cornix ]

Gene ID: 104690977, updated on 3-Aug-2024

Summary

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Gene symbol
SRSF1
Gene description
serine and arginine rich splicing factor 1
See related
EnsemblRapid:ENSCCCG00025009189
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See SRSF1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 19 NC_046348.1 (9965028..9968836)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959541.1 (1215245..1217831, complement)

Chromosome 19 - NC_046348.1Genomic Context describing neighboring genes Neighboring gene dynein light chain LC8-type 2 Neighboring gene uncharacterized LOC120411004 Neighboring gene vascular endothelial zinc finger 1 Neighboring gene CUE domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046348.1 Reference ASM73873v5 Primary Assembly

    Range
    9965028..9968836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039563013.1 → XP_039418947.1  serine/arginine-rich splicing factor 1

    Related
    ENSCCCP00025016034.1, ENSCCCT00025019001.1
    Conserved Domains (2) summary
    cd12597
    Location:12 → 90
    RRM1_SRSF1; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins
    cd12767
    Location:113 → 196
    RRM2_SRSF1; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins

RNA

  1. XR_005603409.1 RNA Sequence

    Related
    ENSCCCT00025018991.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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