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PCYT1A phosphate cytidylyltransferase 1A, choline [ Corvus cornix cornix ]

Gene ID: 104687935, updated on 3-Aug-2024

Summary

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Gene symbol
PCYT1A
Gene description
phosphate cytidylyltransferase 1A, choline
See related
EnsemblRapid:ENSCCCG00025008215
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See PCYT1A in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 9 NC_046339.1 (9998238..10018096, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959397.1 (1888971..1908832)

Chromosome 9 - NC_046339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120410463 Neighboring gene transferrin receptor Neighboring gene solute carrier family 51 member A Neighboring gene dynein light chain Tctex-type 2B Neighboring gene programmed cell death 1 Neighboring gene uncharacterized LOC104688122

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase A
Names
phosphate cytidylyltransferase 1, choline, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046339.1 Reference ASM73873v5 Primary Assembly

    Range
    9998238..10018096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010397200.4 → XP_010395502.1  choline-phosphate cytidylyltransferase A

    See identical proteins and their annotated locations for XP_010395502.1

    Conserved Domains (1) summary
    PLN02413
    Location:72 → 309
    PLN02413; choline-phosphate cytidylyltransferase

  2. XM_010397201.4 → XP_010395503.1  choline-phosphate cytidylyltransferase A

    See identical proteins and their annotated locations for XP_010395503.1

    Related
    ENSCCCP00025014420.1, ENSCCCT00025017003.1
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 309
    PLN02413; choline-phosphate cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

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