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SULF2 sulfatase 2 [ Corvus cornix cornix ]

Gene ID: 104687575, updated on 3-Aug-2024

Summary

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Gene symbol
SULF2
Gene description
sulfatase 2
See related
EnsemblRapid:ENSCCCG00025010227
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See SULF2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
25
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 20 NC_046349.1 (14850825..14973719)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959386.1 (77599..181811, complement)

Chromosome 20 - NC_046349.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 Neighboring gene uncharacterized LOC120411050 Neighboring gene nuclear receptor coactivator 3 Neighboring gene uncharacterized LOC120411077

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046349.1 Reference ASM73873v5 Primary Assembly

    Range
    14850825..14973719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039563710.1 → XP_039419644.1  extracellular sulfatase Sulf-2 isoform X2

    Conserved Domains (3) summary
    cd16147
    Location:172 → 514
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:661 → 799
    DUF3740; Sulfatase protein
    cl23718
    Location:887 → 936
    ALP_like; alkaline phosphatases and sulfatases

  2. XM_039563709.1 → XP_039419643.1  extracellular sulfatase Sulf-2 isoform X1

    Related
    ENSCCCP00025017840.1, ENSCCCT00025021144.1
    Conserved Domains (3) summary
    cd16147
    Location:133 → 475
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:622 → 760
    DUF3740; Sulfatase protein
    cl23718
    Location:848 → 897
    ALP_like; alkaline phosphatases and sulfatases

  3. XM_039563712.1 → XP_039419646.1  extracellular sulfatase Sulf-2 isoform X3

    Related
    ENSCCCP00025017800.1, ENSCCCT00025021100.1
    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:532 → 670
    DUF3740; Sulfatase protein
    cl23718
    Location:758 → 807
    ALP_like; alkaline phosphatases and sulfatases

  4. XM_019284388.3 → XP_019139933.3  extracellular sulfatase Sulf-2 isoform X3

    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:532 → 670
    DUF3740; Sulfatase protein
    cl23718
    Location:758 → 807
    ALP_like; alkaline phosphatases and sulfatases

  5. XM_039563711.1 → XP_039419645.1  extracellular sulfatase Sulf-2 isoform X3

    Related
    ENSCCCP00025017786.1, ENSCCCT00025021084.1
    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:532 → 670
    DUF3740; Sulfatase protein
    cl23718
    Location:758 → 807
    ALP_like; alkaline phosphatases and sulfatases

  6. XM_039563714.1 → XP_039419648.1  extracellular sulfatase Sulf-2 isoform X4

    Conserved Domains (3) summary
    cd16147
    Location:1 → 325
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:472 → 610
    DUF3740; Sulfatase protein
    cl23718
    Location:698 → 747
    ALP_like; alkaline phosphatases and sulfatases

  7. XM_039563713.1 → XP_039419647.1  extracellular sulfatase Sulf-2 isoform X3

    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:532 → 670
    DUF3740; Sulfatase protein
    cl23718
    Location:758 → 807
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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