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THOC1 THO complex 1 [ Corvus cornix cornix ]

Gene ID: 104687307, updated on 3-Aug-2024

Summary

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Gene symbol
THOC1
Gene description
THO complex 1
See related
EnsemblRapid:ENSCCCG00025004229
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See THOC1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 2 NC_046333.1 (105727194..105747274)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959364.1 (10087351..10106120)

Chromosome 2 - NC_046333.1Genomic Context describing neighboring genes Neighboring gene clusterin like 1 Neighboring gene collectin subfamily member 12 Neighboring gene ubiquitin specific peptidase 14 Neighboring gene Rho associated coiled-coil containing protein kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of THO complex part of transcription export complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046333.1 Reference ASM73873v5 Primary Assembly

    Range
    105727194..105747274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019284029.3 → XP_019139574.1  THO complex subunit 1 isoform X1

    Related
    ENSCCCP00025007762.1, ENSCCCT00025008737.1
    Conserved Domains (2) summary
    cd08318
    Location:572 → 657
    Death_NMPP84; Death domain of Nuclear Matrix Protein P84
    pfam11957
    Location:70 → 545
    efThoc1; THO complex subunit 1 transcription elongation factor

  2. XM_010396365.4 → XP_010394667.1  THO complex subunit 1 isoform X2

    Related
    ENSCCCP00025007749.1, ENSCCCT00025008724.1
    Conserved Domains (2) summary
    cd08318
    Location:564 → 649
    Death_NMPP84; Death domain of Nuclear Matrix Protein P84
    pfam11957
    Location:70 → 537
    efThoc1; THO complex subunit 1 transcription elongation factor

  3. XM_019284030.3 → XP_019139575.1  THO complex subunit 1 isoform X3

    Conserved Domains (1) summary
    pfam11957
    Location:70 → 538
    efThoc1; THO complex subunit 1 transcription elongation factor
Nucleotide Protein
Heading Accession and Version

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