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B4GALT3 beta-1,4-galactosyltransferase 3 [ Corvus cornix cornix ]

Gene ID: 104687054, updated on 3-Aug-2024

Summary

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Gene symbol
B4GALT3
Gene description
beta-1,4-galactosyltransferase 3
See related
EnsemblRapid:ENSCCCG00025015263
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See B4GALT3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 1 NC_046332.1 (22691001..22705543, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959353.1 (7875808..7890350, complement)

Chromosome 1 - NC_046332.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 39A Neighboring gene beta-1,4-galactosyltransferase 4 Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like Neighboring gene Rho GTPase activating protein 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046332.1 Reference ASM73873v5 Primary Assembly

    Range
    22691001..22705543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010395971.3 → XP_010394273.1  beta-1,4-galactosyltransferase 3

    Related
    ENSCCCP00025026314.1, ENSCCCT00025031577.1
    Conserved Domains (1) summary
    cd00899
    Location:117 → 336
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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