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GOLPH3 golgi phosphoprotein 3 [ Corvus cornix cornix ]

Gene ID: 104686587, updated on 3-Aug-2024

Summary

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Gene symbol
GOLPH3
Gene description
golgi phosphoprotein 3
See related
EnsemblRapid:ENSCCCG00025011235
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See GOLPH3 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
4
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) Z NC_046357.1 (13949552..13982394)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959331.1 (2407774..2440628, complement)

Chromosome Z - NC_046357.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA66 Neighboring gene zinc finger RNA binding protein Neighboring gene myotubularin related protein 12 Neighboring gene PDZ domain containing 2 Neighboring gene translation initiation factor IF-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi to plasma membrane protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi vesicle budding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi phosphoprotein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046357.1 Reference ASM73873v5 Primary Assembly

    Range
    13949552..13982394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010395138.4 → XP_010393440.2  Golgi phosphoprotein 3

    Related
    ENSCCCP00025019488.1, ENSCCCT00025023048.1
    Conserved Domains (1) summary
    pfam05719
    Location:92 → 301
    GPP34; Golgi phosphoprotein 3 (GPP34)
Nucleotide Protein
Heading Accession and Version

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